ABOUT THIS RECORDspecies: Triticum monococcum
miRNA family: MIR1171
source: miRNEST
Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGTGGAGTGGACTGGAGT miRNA* TTTTTACTACTGTACTCTACT mismatches: 4 bulges: 0 |
pre-miRNA
TGCTCAGCCAGTGGAGTGGAGTGGACTGGAGTCCTACTTTTTACTACTGTACTCTACTAGGTGTGG
dot-bracket secondary structure
......((((((((((((.(((((...(((((...)))))...))))).))))))))).)))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGCTCAGCCAGTGGAGTGGAGTGGACTGGAGTCCTACTTTTTACTACTGTACTCTACTAGGTGTGG
dot-bracket secondary structure
......((((((((((((.(((((...(((((...)))))...))))).))))))))).)))....
SIMILARITIES| miRBase cre-MIR1171: 0.0007 PMRD cre-miR1171: 0.0007 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
