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Species belonging to selected taxon:

Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST002783
species: Triticum monococcum
miRNA family: MIR1171
source: miRNEST

Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGTGGAGTGGACTGGAGT

miRNA*
TTTTTACTACTGTACTCTACT

mismatches: 4
bulges: 0

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pre-miRNA
TGCTCAGCCAGTGGAGTGGAGTGGACTGGAGTCCTACTTTTTACTACTGTACTCTACTAGGTGTGG

dot-bracket secondary structure
......((((((((((((.(((((...(((((...)))))...))))).))))))))).)))....


SIMILARITIES
miRBase cre-MIR1171: 0.0007

PMRD cre-miR1171: 0.0007

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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