ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCATCTGTAAAGAAATATGA miRNA* ATATTTCCTTGCGGAGNAGT mismatches: 3 bulges: 1 |
pre-miRNA
TATAAACTACTCCATCTGTAAAGAAATATGAGAGTGTTTAGATCACTATTTTGCTTTTATATTTCCTTGCGGAGNAGTAGTTTCT
dot-bracket secondary structure
...((((((((...(((((((.((((((((((((((..(((....)))...)))))))))))))).)))))))..))))))))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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TATAAACTACTCCATCTGTAAAGAAATATGAGAGTGTTTAGATCACTATTTTGCTTTTATATTTCCTTGCGGAGNAGTAGTTTCT
dot-bracket secondary structure
...((((((((...(((((((.((((((((((((((..(((....)))...)))))))))))))).)))))))..))))))))..
SIMILARITIES| miRBase tae-MIR1121: 0.00000000002 PMRD tae-miR2033b: 0.000000000001 microPC miR1121: 0.00002 | UniProt no hits RFAM MIR1122: 0.00000000008 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
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