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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002957
species: Centaurea solstitialis
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTACTCCCTCTGTCCCAAAAG

miRNA*
 CTTGGACGGAGGGAGTAATG

mismatches: 2
bulges: 1
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pre-miRNA
 CTAGAATTTGTGTACTCCCTCTGTCCCAAAAGAGGTGTCCACTTTCAAACTACGGGATTGAGATACTCCTTACTCCACCTATAATCAAGGGCAAACTGTA
GAAACCCAAAACTGTGATAATTATACATCTCTAGAACTATGCCTTTCTCATCGCGTACATCTCTCTTGGACGGAGGGAGTAATGTATAAGAG

dot-bracket secondary structure
......((((((((((((((((((((.((.((((((((.............(((.(((.((((........................((((((..(((.(
((..........((((.......))))))).))).....))))))))))))).))))))))))).))))))))))))))))...))))))..


SIMILARITIES
miRBase osa-MIR1862d: 0.0006

PMRD osa-miR1862d: 0.0006

microPC no hits		UniProt no hits

RFAM MIR1122: 0.0007		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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