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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002959
species: Centaurea solstitialis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 ACAGGGACGAGACAGAGCCCG

mismatches: 5
bulges: 0
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pre-miRNA
 TTTGCGTGATTTTAATGGTATAGATGGAGATGTGAGGGTAGACAGGGACGAGACAGAGCCCGAAAAAGCCTAGTCAATACTTGGGTCAGTATTGTTGTCT
TTTTCATGCACTGCCTCTTCCCTGGCTATCCTCTTCTCTCTATACTCGTGTTGTTTGATTATGTT

dot-bracket secondary structure
...((((((((.((((((((((((..((((...((((((((.((((((.(((.(((.((..(((((((..(((.(((((((......)))))))))).))
)))))..)).))).))).)))))).)))))))).))))))))))))...))))...)))))))).


SIMILARITIES
miRBase ahy-MIR408: 0.000002

PMRD ppt-miR408b: 0.000002

microPC miR408: 0.000002		UniProt no hits

RFAM MIR408: 0.00004		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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