miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002987
species: Artemisia annua
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCTCTCCGTCTCAAAAT

miRNA*
 TTTGAGACGGAGTGAGTATTA

mismatches: 1
bulges: 0
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pre-miRNA
 TTAAACTTTTGATACTCTCTCCGTCTCAAAATTATTGTCAGGAGACAAAAATCATCCAGTTTAATAAAAGTAAGACCACTACAATTTTTAACCATTCAAA
TGTAATATTCCCTCACTTTATTCTATTTTTATTACTTAATGTGGAAAGTGGAGAATTAATTTGAGATATCCTAATAAGGAAATGTGGACCATTATTTTGA
GACGGAGTGAGTATTATATTTTAT

dot-bracket secondary structure
.........((((((((.((((((((((((((.((.(((.(((...........))).(((....(((((((.......)))..)))).)))..((((((
(.....((((..((((((...(((((..(((.....))).))))))))))).))))..)))))))((.((((....)))).))...))).)).)))))))
))))))).))))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM MIR1122: 0.0008		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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