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Species belonging to selected taxon:
Barnadesia spinosa
,
Cichorium intybus
,
Gerbera hybrid cultivar
,
Guizotia abyssinica
,
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Lactuca perennis
,
Lactuca saligna
,
Lactuca sativa
,
Lactuca serriola
,
Lactuca virosa
,
Parthenium argentatum
,
Taraxacum kok-saghyz
,
Taraxacum officinale
,
Zinnia violacea
,
Carthamus tinctorius
,
Centaurea maculosa
,
Centaurea solstitialis
,
Cichorium endivia
,
Artemisia annua
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST003001
species:
Artemisia annua
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Artemisia annua
Artemisia
Artemisiinae
Anthemideae
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCGTCCCAAAAT
miRNA*
TTTTGGACGGAGGGAGTGCGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTAATATGTAAAATAATTCTTCTCAAAATTTTATTATAACTAGTGCATATTCCTTGTAAC
ATACTCCCTCCGTCCCAAAAT
TTAAGTTCAGTTTGACTTT
TTTTAATCCAACTTTGACCTTAAATAGTTTCGGTTGTGTTATATAATATTTGATGCAAAATATATAAATGGATTGGATTTTAAATATATTTTCATATGAT
ATAATTTTCATCAAGTATTATGTAATAAAAGCAAAAATATTTATGGTCAAAGTTAGATTCAAAAAGTCAAACTGGACTTAAAT
TTTTGGACGGAGGGAGT
GCGA
GATATGACTGATTAATAAATACGAATGGCTTAAGTGTGAAGAATAATTAAAATGTGA
dot-bracket secondary structure
...........(((.(((((((.((....(((((((....((((.(((((..(((((...
..(((((((((((((.(((((
(((((((((((((((((((
((..((((.((((((((((.((((((.(((..(((.(((((((((((((((((((.(((.(((((..(((((.((.(((...))).))..)))))...))
))).))).)))))))))))))))))))..))).))).)))))).)))))))))).)))).)))))))))))))))))))))))
))).)))))))))))))
))))
))))))))))..)))))))...............)).))))))).))).........
SIMILARITIES
miRBase
tae-MIR1122
:
0.00008
PMRD
osa-miRf10218-akr
:
0.00002
microPC
miR1439
:
0.00008
UniProt
no hits
RFAM
MIR1122: 0.00009
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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