miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003001
species: Artemisia annua
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCGTCCCAAAAT

miRNA*
TTTTGGACGGAGGGAGTGCGA

mismatches: 3
bulges: 0

View larger
pre-miRNA
TTAATATGTAAAATAATTCTTCTCAAAATTTTATTATAACTAGTGCATATTCCTTGTAACATACTCCCTCCGTCCCAAAATTTAAGTTCAGTTTGACTTT
TTTTAATCCAACTTTGACCTTAAATAGTTTCGGTTGTGTTATATAATATTTGATGCAAAATATATAAATGGATTGGATTTTAAATATATTTTCATATGAT
ATAATTTTCATCAAGTATTATGTAATAAAAGCAAAAATATTTATGGTCAAAGTTAGATTCAAAAAGTCAAACTGGACTTAAATTTTTGGACGGAGGGAGT
GCGA
GATATGACTGATTAATAAATACGAATGGCTTAAGTGTGAAGAATAATTAAAATGTGA


dot-bracket secondary structure
...........(((.(((((((.((....(((((((....((((.(((((..(((((.....(((((((((((((.((((((((((((((((((((((((
((..((((.((((((((((.((((((.(((..(((.(((((((((((((((((((.(((.(((((..(((((.((.(((...))).))..)))))...))
))).))).)))))))))))))))))))..))).))).)))))).)))))))))).)))).)))))))))))))))))))))))))).)))))))))))))
))))
))))))))))..)))))))...............)).))))))).))).........



SIMILARITIES
miRBase tae-MIR1122: 0.00008

PMRD osa-miRf10218-akr: 0.00002

microPC miR1439: 0.00008
UniProt no hits

RFAM MIR1122: 0.00009
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;