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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST003043
species: Brachypodium distachyon
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTACTCCCTCTGTCCCATATT

miRNA*
 TATGAGACGGAAGGAGTATAT

mismatches: 2
bulges: 0
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pre-miRNA
 GGACTATCTATGTACTCCCTCTGTCCCATATTAAGTGATAAAATATTACATGTATCTAGATGTTTATTTTTTGTATAGATACATTCATATTTGGGCAAAT
TTGAGTCACTTAATATGAGACGGAAGGAGTATATGTTGTGCA

dot-bracket secondary structure
..((....((((((((((.((((((.(((((((((((((.((((((...(((((((((.((...........)).)))))))))..))))))...((...
.)).))))))))))))).)))))).))))))))))..))...


SIMILARITIES
miRBase bdi-MIR5171: 0.000000000002

PMRD bdi-miR1135: 0.000007

microPC no hits		UniProt no hits

RFAM MIR1122: 3e-27		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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