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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003152
species: Helianthus annuus
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCCTGGCTCCCTGTATGCCAT

miRNA*
 GGCGTATGAGGAGCCAAGCAT

mismatches: 2
bulges: 0
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pre-miRNA
 TATAAGTATATGCCTGGCTCCCTGTATGCCATTTCCAGAGCCCACCAGTATCACCGGTGACCTCCGTGAATGGCGTATGAGGAGCCAAGCATATTCCCCA


dot-bracket secondary structure
.......((((((.(((((((.((((((((((((...(((..((((.((...)).))))..)))...)))))))))))).))))))).))))))......



SIMILARITIES
miRBase vvi-MIR160e: 9e-20

PMRD vvi-miR160f: 9e-20

microPC miR160: 4e-19		UniProt no hits

RFAM mir-160: 1e-16		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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