ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-599
source: miRBase, original name: mmu-mir-599 (MI0012529)
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGTGTCAGTTTATCAAAC miRNA* TTGATAAGATGACATAGGA mismatches: 2 bulges: 0 |
pre-miRNA
TGCTGTCCACAGTGTATTTGATAAGATGACATAGGAGAGGAACTTCTTTCACCTTTGTGTCAGTTTATCAAACCCATACCTGGATGAC
dot-bracket secondary structure
....(((((..(((..(((((((((.((((((((((((((....))))))....)))))))).)))))))))..)))...)))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
TGCTGTCCACAGTGTATTTGATAAGATGACATAGGAGAGGAACTTCTTTCACCTTTGTGTCAGTTTATCAAACCCATACCTGGATGAC
dot-bracket secondary structure
....(((((..(((..(((((((((.((((((((((((((....))))))....)))))))).)))))))))..)))...)))))...
SIMILARITIES| miRBase cfa-mir-599: 5e-21 PMRD no hits microPC no hits | UniProt no hits RFAM mir-599: 1e-43 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
