ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIRf532
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCGAGCCAGACAACATTCCT miRNA* GAATGAAGCCTGGTCCGAGAA mismatches: 5 bulges: 0 |
pre-miRNA
AAAGCAAAAGTTGGGTGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTTGTGTAAGAGGGTAAATTTCCATTGGAAACTTTCACTGATCTCAGTACT
CTACTCCTCCTCCTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCAACCTCACCTTTGCA
dot-bracket secondary structure
...(((((.((.((((((((((((((....(((((.((((..((((............(((((((..(((((...))))).....((((....))))...
.))).))))..........)))).)))).)))))....)))))))))).)))).)).))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAAGCAAAAGTTGGGTGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTTGTGTAAGAGGGTAAATTTCCATTGGAAACTTTCACTGATCTCAGTACT
CTACTCCTCCTCCTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCAACCTCACCTTTGCA
dot-bracket secondary structure
...(((((.((.((((((((((((((....(((((.((((..((((............(((((((..(((((...))))).....((((....))))...
.))).))))..........)))).)))).)))))....)))))))))).)))).)).))))).
SIMILARITIES| miRBase gma-MIR166b: 8e-77 PMRD gma-miR166b: 8e-77 microPC miR166: 0.0000000000006 | UniProt no hits RFAM mir-166: 0.00000000000004 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
