miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST003437
species: Glycine max
miRNA family: MIRf532
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCGAGCCAGACAACATTCCT

miRNA*
GAATGAAGCCTGGTCCGAGAA

mismatches: 5
bulges: 0

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pre-miRNA
AAAGCAAAAGTTGGGTGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTTGTGTAAGAGGGTAAATTTCCATTGGAAACTTTCACTGATCTCAGTACT
CTACTCCTCCTCCTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCAACCTCACCTTTGCA


dot-bracket secondary structure
...(((((.((.((((((((((((((....(((((.((((..((((............(((((((..(((((...))))).....((((....))))...
.))).))))..........)))).)))).)))))....)))))))))).)))).)).))))).



SIMILARITIES
miRBase gma-MIR166b: 8e-77

PMRD gma-miR166b: 8e-77

microPC miR166: 0.0000000000006
UniProt no hits

RFAM mir-166: 0.00000000000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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