ABOUT THIS RECORDspecies: Bombyx mori
miRNA family: mir-124
source: miRBase, original name: bmo-mir-124 (MI0004976)
Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAGGCACGCGGTGAATGCCAAG miRNA* TCGCGTTCACTGCCGGAGCCGTTATG mismatches: 4 bulges: 3 |
pre-miRNA
CAGTCCACCTCCTCGCGTTCACTGCCGGAGCCGTTATGTATATTTAAAATTCATAAGGCACGCGGTGAATGCCAAGAGCGGACTC
dot-bracket secondary structure
.(((((..(((...(((((((((((.(..(((.(((((.............)))))))).))))))))))))...))).))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Tong CZ, Jin YF, Zhang YZ, J Zhejiang Univ Sci B. 7:806-816(2006)., "Computational prediction of microRNA genes in silkworm genome"
CAGTCCACCTCCTCGCGTTCACTGCCGGAGCCGTTATGTATATTTAAAATTCATAAGGCACGCGGTGAATGCCAAGAGCGGACTC
dot-bracket secondary structure
.(((((..(((...(((((((((((.(..(((.(((((.............)))))))).))))))))))))...))).))))).
SIMILARITIES| miRBase ame-mir-124: 0.0000000000003 PMRD no hits microPC no hits | UniProt no hits RFAM mir-124: 1e-40 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Tong CZ, Jin YF, Zhang YZ, J Zhejiang Univ Sci B. 7:806-816(2006)., "Computational prediction of microRNA genes in silkworm genome"
