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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003574
species: Zea mays
miRNA family: miR166d
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTCTGGTTCAAGG

miRNA*
 TCGGACCAGGTTTCTTCCCC

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTTTTGCTTTGTGATCCATCTGTGTAGAGCTTCTTAGTATCCTTGGATCTGCAGATCTCGGACCAGG
TTTCTTCCCCTCCAAAAT

dot-bracket secondary structure
.......(((.((((.....((((((((.(((((...(((.....((((((.......(((...))).........)))))).)))))))).))))))))
....)))).)))......


SIMILARITIES
miRBase zma-MIR166d: 8e-36

PMRD zma-miR166d: 8e-36

microPC miR166: 0.0000004		UniProt no hits

RFAM mir-166: 4e-38		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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