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Species belonging to selected taxon:
Drosophila melanogaster
,
Drosophila simulans
,
Glossina morsitans morsitans
,
Drosophila sechellia
,
Drosophila auraria
,
Drosophila pseudoobscura
,
Teleopsis dalmanni
,
Drosophila willistoni
,
Drosophila ananassae
,
Drosophila virilis
,
Drosophila erecta
,
Drosophila grimshawi
,
Ceratitis capitata
,
Drosophila mojavensis
,
Cochliomyia hominivorax
,
Haematobia irritans irritans
,
Drosophila yakuba
ABOUT THIS RECORD
ID:
MNEST036932
species:
Drosophila pseudoobscura
miRNA family:
mir-99
source:
miRBase, original name:
dps-mir-100
(
MI0001322
)
Taxonomy by NCBI:
Drosophila pseudoobscura
pseudoobscura subgroup
obscura group
Sophophora
Drosophila
Drosophiliti
Drosophilina
Drosophilini
Drosophilinae
Drosophilidae
Ephydroidea
Acalyptratae
Schizophora
Cyclorrhapha
Eremoneura
Muscomorpha
Brachycera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AACCCGTAATTCCGAACTTGTG
miRNA*
CAAGACCGGCATTATGGGAGTC
mismatches:
5
bulges:
0
View larger
pre-miRNA
CCATTAACAGA
AACCCGTAATTCCGAACTTGTG
CTGTTTTATATCTGTTA
CAAGACCGGCATTATGGGAGTC
TGTCAATGCAAACAACTGGTTTTTGGCA
dot-bracket secondary structure
.((((.(((((
..((((((((.(((..((((((
(.(........).).))
))))..))).))))))))..))
))).))))....................
SIMILARITIES
miRBase
dme-mir-100
:
1e-49
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
dpe-mir-100-2
from miRBase (
MNEST036856
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record