ABOUT THIS RECORDspecies: Glycine soja
miRNA family: MIR1507
source: miRBase, original name: gso-MIR1507a (MI0015363)
Taxonomy by NCBI:
Glycine soja Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTCATTCCATACATCGTCTGA miRNA* AGAGGTGTATGGAGTGAGAGA mismatches: 0 bulges: 1 |
pre-miRNA
GTTTGTCAGAGGTGTATGGAGTGAGAGAAGGGAAAGGGTATTTTCCGATTCTGTCGTTACTCTCTTCCCTCTCTCATTCCATACATCGTCTGACGAAC
dot-bracket secondary structure
((((((((((((((((((((((((((((.(((((((((((.....((((...)))).)))))).))))))))))))))))))))))).))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern
references
[1] Chen R, Hu Z, Zhang H, J Integr Plant Biol. 51:1071-1079(2009)., "Identification of microRNAs in wild soybean (Glycine soja)"
GTTTGTCAGAGGTGTATGGAGTGAGAGAAGGGAAAGGGTATTTTCCGATTCTGTCGTTACTCTCTTCCCTCTCTCATTCCATACATCGTCTGACGAAC
dot-bracket secondary structure
((((((((((((((((((((((((((((.(((((((((((.....((((...)))).)))))).))))))))))))))))))))))).))))))))))
SIMILARITIES| miRBase gma-MIR1507a: 2e-48 PMRD gma-miR1507a: 2e-48 microPC miR1507: 6e-30 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern
references
[1] Chen R, Hu Z, Zhang H, J Integr Plant Biol. 51:1071-1079(2009)., "Identification of microRNAs in wild soybean (Glycine soja)"
