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Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040635
species: Glycine soja
miRNA family: MIR1507
source: miRBase, original name: gso-MIR1507a (MI0015363)

Taxonomy by NCBI:
Glycine soja Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTCATTCCATACATCGTCTGA

miRNA*
AGAGGTGTATGGAGTGAGAGA

mismatches: 0
bulges: 1

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pre-miRNA
GTTTGTCAGAGGTGTATGGAGTGAGAGAAGGGAAAGGGTATTTTCCGATTCTGTCGTTACTCTCTTCCCTCTCTCATTCCATACATCGTCTGACGAAC

dot-bracket secondary structure
((((((((((((((((((((((((((((.(((((((((((.....((((...)))).)))))).))))))))))))))))))))))).))))))))))


SIMILARITIES
miRBase gma-MIR1507a: 2e-48

PMRD gma-miR1507a: 2e-48

microPC miR1507: 6e-30
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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evidence: cloned, Northern

references

[1] Chen R, Hu Z, Zhang H, J Integr Plant Biol. 51:1071-1079(2009)., "Identification of microRNAs in wild soybean (Glycine soja)"




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