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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040730
species: Medicago truncatula
miRNA family: MIR398
source: miRBase, original name: mtr-MIR398c (MI0005611)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCGCCCCTG

miRNA*
 GGGCCGACCCGAGACCACATG

mismatches: 3
bulges: 0
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pre-miRNA
 ATTCCACAGGGCCGACCCGAGACCACATGAAGTTATCATATGTGTCTAAGCTACACATCTCGTGTGTTCTCAGGTCGCCCCTGCTGAA

dot-bracket secondary structure
)...(((((((.(((((.((((.(((((((.(.......((((((.......)))))))))))))).)))).))))).))))).))..


SIMILARITIES
miRBase mtr-MIR398b: 1.0E-15

PMRD vvi-miR398c: 3.0E-7

microPC miR398: 1.0E-6		UniProt no hits

RFAM 8MIR398: 2.0E-14

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Bonnet E, Unpublished (2007).,



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