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Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST042585
species: Sorghum bicolor
miRNA family: MIR396
source: miRBase, original name: sbi-MIR396d (MI0010897)

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCACAGGCTTTCTTGAACTG

miRNA*
 GTTCAAGAAAGTCCTTGGAA

mismatches: 3
bulges: 0
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pre-miRNA
 CTCCACAGGCTTTCTTGAACTGTGAACTCGATCGCGTGCTCTTAGCTTGCTTGCTCTCGCTCGCTTTGTGTTGATGGTTCAAGAAAGTCCTTGGAA

dot-bracket secondary structure
.((((..((((((((((((((((.(((.(((..(((.((....(((......)))...)).))).))).))).))))))))))))))))..)))).


SIMILARITIES
miRBase far-MIR396: 0.00000000008

PMRD far-miR396: 0.00000000008

microPC miR396: 0.0000000003		UniProt no hits

RFAM MIR396: 2e-48

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Zhang L, Ware D, Unpublished (2009).,



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