ABOUT THIS RECORDspecies: Juglans hindsii x Juglans regia
source: microPC, original name: miR167
Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCT miRNA* ATCATATGGCAGCTTCA mismatches: 3 bulges: 1 |
pre-miRNA
TGAAGCTGCCAGCATGATCTAAACTTTCTTCTCGATTAATCAAGGAAAGATCGGATCATATGGCAGCTTCA
dot-bracket secondary structure
.((((((((((..((((((..(.(((((((...((....)).))))))).)..)))))).)))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGAAGCTGCCAGCATGATCTAAACTTTCTTCTCGATTAATCAAGGAAAGATCGGATCATATGGCAGCTTCA
dot-bracket secondary structure
.((((((((((..((((((..(.(((((((...((....)).))))))).)..)))))).)))))))))).
SIMILARITIES| miRBase tcc-MIR167c: 0.00000000005 PMRD sly-miR167: 0.000000003 microPC miR167: 7e-35 | UniProt no hits RFAM MIR167_1: 0.00000001 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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