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Species belonging to selected taxon:

Juglans hindsii x Juglans regia



ABOUT THIS RECORD

ID: MNEST045483
species: Juglans hindsii x Juglans regia
source: microPC, original name: miR167

Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCT

miRNA*
ATCATATGGCAGCTTCA

mismatches: 3
bulges: 1

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pre-miRNA
TGAAGCTGCCAGCATGATCTAAACTTTCTTCTCGATTAATCAAGGAAAGATCGGATCATATGGCAGCTTCA

dot-bracket secondary structure
.((((((((((..((((((..(.(((((((...((....)).))))))).)..)))))).)))))))))).


SIMILARITIES
miRBase tcc-MIR167c: 0.00000000005

PMRD sly-miR167: 0.000000003

microPC miR167: 7e-35
UniProt no hits

RFAM MIR167_1: 0.00000001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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