miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides

ABOUT THIS RECORD

ID: MNEST045804
species: Populus x canadensis
source: microPC, original name: miR472

Taxonomy by NCBI:
Populus x canadensis Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTTTCCCAACTCCACCCATCCC

miRNA*
GATGGGTGAGTGGGGAAGATA

mismatches: 2
bulges: 1

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pre-miRNA
GGATGGGTGAGTGGGGAAGATAACTAAGCTGTGTTTGTTATTTTCCCAACTCCACCCATCCC

dot-bracket secondary structure
((((((((((((.(((((((((((.((((...))))))))))))))).))).))))))))).

UniProt no hits

RFAM no hits

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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