ABOUT THIS RECORDspecies: Gossypium arboreum
source: PMRD, original name: gar-miR164
Taxonomy by NCBI:
Gossypium arboreum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGAAGCAGGGCACGTAAA miRNA* GACGGACCCAATTCATTTCCA mismatches: 9 bulges: 2 |
pre-miRNA
TGGAGAAGCAGGGCACGTAAACCGATTCAGAAACAGGGTTTTTCTTGGCATTGAAACTTGAAGAAGAATCCATTAATGGTGGAAGANCCGGACGGACCCA
ATTCATTTCCA
dot-bracket secondary structure
.(((((.(..(((..(((...(((.(((((...(((((....)))))...))))).............(((((.....))))).....))))))..))).
...).))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
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TGGAGAAGCAGGGCACGTAAACCGATTCAGAAACAGGGTTTTTCTTGGCATTGAAACTTGAAGAAGAATCCATTAATGGTGGAAGANCCGGACGGACCCA
ATTCATTTCCA
dot-bracket secondary structure
.(((((.(..(((..(((...(((.(((((...(((((....)))))...))))).............(((((.....))))).....))))))..))).
...).))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
download this record
