miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST048483
species: Gossypium arboreum
source: PMRD, original name: gar-miR164

Taxonomy by NCBI:
Gossypium arboreum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACGTAAA

miRNA*
GACGGACCCAATTCATTTCCA

mismatches: 9
bulges: 2

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pre-miRNA
TGGAGAAGCAGGGCACGTAAACCGATTCAGAAACAGGGTTTTTCTTGGCATTGAAACTTGAAGAAGAATCCATTAATGGTGGAAGANCCGGACGGACCCA
ATTCATTTCCA


dot-bracket secondary structure
.(((((.(..(((..(((...(((.(((((...(((((....)))))...))))).............(((((.....))))).....))))))..))).
...).))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
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