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Species belonging to selected taxon:

Cucumis melo subsp. melo



ABOUT THIS RECORD

ID: MNEST000491
species: Cucumis melo subsp. melo
miRNA family: MIR319
source: miRNEST

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGACTGAAGGGAGCTCC

miRNA*
 AGCTTTCTTCAGTCCACTC

mismatches: 2
bulges: 0
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pre-miRNA
 TAAGAGAGCTTTCTTCAGTCCACTCATGGGTGGCGGTAGGGTTTAATTAGCTGCCGACTCATTCATTCAAATATTGAGTCCAAAAATTTCAAATCTCAAA
TGGATTCACTAAACGATTGAATGATGCGGGAGACAAATTGAATCTTAAGCTTCCTGTACTTGGACTGAAGGGAGCTCCCTTTTCTTT

dot-bracket secondary structure
.(((.(((((((((((((((((...(((((.(((..((((((((((((..((.(((..(((((((.((...((.((((((((..................
)))))))).))...)).)))))))..))).))...)))))))))))).))).)))))...))))))))))))))))).)))......


SIMILARITIES
miRBase ptc-MIR319a: 1e-35

PMRD ptc-miR319a: 1e-35

microPC miR319: 5e-97		UniProt no hits

RFAM MIR159: 1e-33		most similar mature miRNAs

Identical with: miR319 from microPC (MNEST045333)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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