ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-1950
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTGCATCTAAGGATATGGTCA miRNA* ATCATCTCCTTAAATGCAGAAA mismatches: 3 bulges: 0 |
pre-miRNA
CATGCCCGGCCAAATGCTTTTTCTGCATCTAAGGATATGGTCATTTAATTGTTTTTTTCCATGATCATCTCCTTAAATGCAGAAAAGCAGCCAGTTTTCT
GCT
dot-bracket secondary structure
.......(((....(((((((.((((((.((((((.((((((((................)))))))).)))))).))))))))))))))))........
...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence
CATGCCCGGCCAAATGCTTTTTCTGCATCTAAGGATATGGTCATTTAATTGTTTTTTTCCATGATCATCTCCTTAAATGCAGAAAAGCAGCCAGTTTTCT
GCT
dot-bracket secondary structure
.......(((....(((((((.((((((.((((((.((((((((................)))))))).)))))).))))))))))))))))........
...
SIMILARITIES| miRBase mmu-mir-1950: 4e-22 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
