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Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST004924
species: Mus musculus
miRNA family: miR-1950
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTGCATCTAAGGATATGGTCA

miRNA*
ATCATCTCCTTAAATGCAGAAA

mismatches: 3
bulges: 0

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pre-miRNA
CATGCCCGGCCAAATGCTTTTTCTGCATCTAAGGATATGGTCATTTAATTGTTTTTTTCCATGATCATCTCCTTAAATGCAGAAAAGCAGCCAGTTTTCT
GCT


dot-bracket secondary structure
.......(((....(((((((.((((((.((((((.((((((((................)))))))).)))))).))))))))))))))))........
...



SIMILARITIES
miRBase mmu-mir-1950: 4e-22

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence





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