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Species belonging to selected taxon:
Mus musculus
,
Rattus norvegicus
,
Peromyscus maniculatus bairdii
,
Cavia porcellus
,
Peromyscus polionotus subgriseus
ABOUT THIS RECORD
ID:
MNEST004972
species:
Mus musculus
miRNA family:
miR-3533
source:
miRNEST
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGAAGTGTGATGTGGATAT
miRNA*
ATTCATGAGAACACTTTCAAC
mismatches:
5
bulges:
1
View larger
pre-miRNA
GGAGTCCTGTGGT
ATTCATGAGAACACTTTCAAC
TCCATC
ATGAAGTGTGATGTGGATAT
CCGCAAGAAC
dot-bracket secondary structure
....((.((((((
(((((((...(((((((....
......
..)))))))..)))))))).
))))).))..
SIMILARITIES
miRBase
gga-mir-3533
:
4e-18
PMRD
no hits
microPC
no hits
UniProt
sp|Q6P378|ACTG_XENTR: 0.000007
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record