ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-4328
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCAGTTTTCCCAGGAATCCCT miRNA* GGATTCCTGGAAATACTGTTC mismatches: 3 bulges: 0 |
pre-miRNA
CTCCCACCTTGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTGGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGCTTAGC
dot-bracket secondary structure
......((.((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).)))).)).))))).)).))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCCCACCTTGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTGGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGCTTAGC
dot-bracket secondary structure
......((.((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).)))).)).))))).)).))......
SIMILARITIES| miRBase rno-mir-145: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-145: 8e-36 | most similar mature miRNAs |
Identical with: mmu-mir-145 from miRBase (MNEST031878) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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