miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Mus musculus



ABOUT THIS RECORD

ID: MNEST005108
species: Mus musculus
miRNA family: mir-7
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAAGACTAGTGATTTTGTT

miRNA*
 CAAATCACAGTCTGCCATA

mismatches: 1
bulges: 2
View larger
pre-miRNA
 AGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAAAACGACAACAAATCACAGTCTGCCATATGGCACAGGCCACCT
CTA

dot-bracket secondary structure
)(((.((.(((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).))))))))).)
)).


SIMILARITIES
miRBase mmu-mir-7a-1: 9.0E-54

PMRD no hits

microPC no hits		UniProt no hits

RFAM 7mir-7: 8.0E-36		most similar mature miRNAs

Identical with: mmu-mir-7a-1 from miRBase (MNEST031767), mdo-mir-7 from miRBase

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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