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Species belonging to selected taxon:

Mus musculus, Rattus norvegicus



ABOUT THIS RECORD

ID: MNEST005108
species: Mus musculus
miRNA family: mir-7
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAAGACTAGTGATTTTGTT

miRNA*
CAAATCACAGTCTGCCATA

mismatches: 1
bulges: 2

View larger
pre-miRNA
GGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAAAACGACAACAAATCACAGTCTGCCATATGGCACAGGCCACCT
CTA


dot-bracket secondary structure
(((.((.(((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).))))))))).)
)).



SIMILARITIES
miRBase mmu-mir-7a-1: 9e-54

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-7: 8e-36
most similar mature miRNAs

Identical with: mmu-mir-7a-1 from miRBase (MNEST031767)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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