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Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST051323
species: Phaseolus coccineus
source: PMRD, original name: pco-miR157

Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGATAGAGAGCAT

miRNA*
 GTTCATGGTTACATAGAAGAAATTATTCTCCACGACAGTCAACT

mismatches: 10
bulges: 23
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pre-miRNA
 TTGACAGAAGATAGAGAGCATCCTTTGAGGCCAGCAACAGTGATTTGAGTTTCAAGATCTCAATGGGAAACTTTATTTCAATCACATGCTTGCCTCAAGG
TTTATTAATGTTCATGGTTACATAGAAGAAATTATTCTCCACGACAGTCAACTGCATTTTTGCGACGCCTCTCATTATGGCCAA

dot-bracket secondary structure
(((((..........((((((.(((((((((.((((...((((((.(((((((.............)))))))......)))))).)))).)))))))))
.......))))))...(((....((((.......))))....))).)))))..(((....)))...(((.........)))...


SIMILARITIES
miRBase vvi-MIR156i: 0.0006

PMRD lja-miR157c: 0.00000000004

microPC miR157: 0.0006		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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