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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000531
species: Cynodon dactylon
miRNA family: MIRf181
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGTGCCCATCTTCTCCACCG

miRNA*
 GTGGAGAAGCAGGGCACGTGC

mismatches: 2
bulges: 0
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pre-miRNA
 AGATAAGAGAGATAGATGGTGGCTGTGCATGGTGGAGAAGCAGGGCACGTGCATTACCATCCAATGCCGCTGGTCATGCTCCTGCTCTACCTCCTCCCTC
TGAGTTCTGAGCTTACCATGGGATCCGGATGGACGGATGGTTCTTCATGTGCCCATCTTCTCCACCGAGCACAAACTGTCTCAATAAACCTCATA

dot-bracket secondary structure
......(((..(((((((((...(((((.(((((((((((..(((((((((....(((((((....(((.((((...((((..((((.............
.))))...))))..)))))))..(((....))).)))))))....)))))))))..))))))))))).))))).)))))))..))....)))...


SIMILARITIES
miRBase zma-MIR164b: 8e-22

PMRD zma-miR164b: 8e-22

microPC miR164: 0.00000000000001		UniProt no hits

RFAM MIR164: 9e-19		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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