miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Cynodon dactylon
ABOUT THIS RECORD
ID:
MNEST000531
species:
Cynodon dactylon
miRNA family:
MIRf181
source:
miRNEST
Taxonomy by NCBI:
Cynodon dactylon
Cynodon
Eleusininae
Cynodonteae
Chloridoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTGCCCATCTTCTCCACCG
miRNA*
GTGGAGAAGCAGGGCACGTGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGATAAGAGAGATAGATGGTGGCTGTGCATG
GTGGAGAAGCAGGGCACGTGC
ATTACCATCCAATGCCGCTGGTCATGCTCCTGCTCTACCTCCTCCCTC
TGAGTTCTGAGCTTACCATGGGATCCGGATGGACGGATGGTTCTTC
ATGTGCCCATCTTCTCCACCG
AGCACAAACTGTCTCAATAAACCTCATA
dot-bracket secondary structure
......(((..(((((((((...(((((.((
(((((((((..(((((((((.
...(((((((....(((.((((...((((..((((.............
.))))...))))..)))))))..(((....))).)))))))....)
))))))))..)))))))))))
.))))).)))))))..))....)))...
SIMILARITIES
miRBase
zma-MIR164b
:
8e-22
PMRD
zma-miR164b
:
8e-22
microPC
miR164
:
0.00000000000001
UniProt
no hits
RFAM
MIR164: 9e-19
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record