ABOUT THIS RECORDspecies: Dioscorea alata
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Dioscorea alata Dioscorea Dioscoreaceae Dioscoreales Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCTTCATCTTCT miRNA* ATGATGATGATGATGATGACA mismatches: 2 bulges: 0 |
pre-miRNA
ATTCCCCATCTTCATCATCATCTTCATCTTCTTCAATGCTTCCACTCACATTAACCTGGAGTGACCAAACAGAAGAGTTATCATCTTCTTCTGGAGATGA
TGATGATGATGATGACAATGATAAG
dot-bracket secondary structure
.......(((.(((((((((((.(((((.((((((.((....(((((.((......)))))))..))...((((((.......))))))..)))))).))
))).)))))))))))....)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTCCCCATCTTCATCATCATCTTCATCTTCTTCAATGCTTCCACTCACATTAACCTGGAGTGACCAAACAGAAGAGTTATCATCTTCTTCTGGAGATGA
TGATGATGATGATGACAATGATAAG
dot-bracket secondary structure
.......(((.(((((((((((.(((((.((((((.((....(((((.((......)))))))..))...((((((.......))))))..)))))).))
))).)))))))))))....)))...
SIMILARITIES| miRBase no hits PMRD ghr-miR414f: 0.0004 microPC no hits | UniProt no hits RFAM mir-598: 0.0004 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
