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Species belonging to selected taxon:

Dioscorea alata



ABOUT THIS RECORD

ID: MNEST000546
species: Dioscorea alata
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Dioscorea alata Dioscorea Dioscoreaceae Dioscoreales Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCTTCATCTTCT

miRNA*
ATGATGATGATGATGATGACA

mismatches: 2
bulges: 0

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pre-miRNA
ATTCCCCATCTTCATCATCATCTTCATCTTCTTCAATGCTTCCACTCACATTAACCTGGAGTGACCAAACAGAAGAGTTATCATCTTCTTCTGGAGATGA
TGATGATGATGATGACA
ATGATAAG


dot-bracket secondary structure
.......(((.(((((((((((.(((((.((((((.((....(((((.((......)))))))..))...((((((.......))))))..)))))).))
))).)))))))))))..
..)))...



SIMILARITIES
miRBase no hits

PMRD ghr-miR414f: 0.0004

microPC no hits
UniProt no hits

RFAM mir-598: 0.0004
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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