ABOUT THIS RECORDspecies: Ciona intestinalis
miRNA family: mir-580
source: miRNEST
Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGCGAATGATGAATCATCAT miRNA* GATGAGTCATCAACGCTAGGC mismatches: 4 bulges: 2 |
pre-miRNA
GTTGTTTTTGCTTGCGAATGATGAATCATCATATTTTCGATGAGTCATCAACGCTAGGCATTGTATG
dot-bracket secondary structure
........((((((((..((((((.(((((........))))).)))))).))).))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GTTGTTTTTGCTTGCGAATGATGAATCATCATATTTTCGATGAGTCATCAACGCTAGGCATTGTATG
dot-bracket secondary structure
........((((((((..((((((.(((((........))))).)))))).))).))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
