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Species belonging to selected taxon:
Elaeis guineensis
ABOUT THIS RECORD
ID:
MNEST000561
species:
Elaeis guineensis
miRNA family:
MIRf1372
source:
miRNEST
Taxonomy by NCBI:
Elaeis guineensis
Elaeis
Elaeidinae
Cocoseae
Arecoideae
Arecaceae
Arecales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGAGCTTCTCGAAGATGTCG
miRNA*
GCGTGCTTCGCAAGCTCGCCG
mismatches:
1
bulges:
2
View larger
pre-miRNA
CCCTCCGAGACG
GCGTGCTTCGCAAGCTCGCCG
GGGAGGACCAGGCGGACAGAGGTCTGAATCTCCCGGGAGGTAATGGTAGGCTTCTTGTTGTAGCGGG
CAAGCCTGGACGCCTCCTGG
GCGAGCTTCTCGAAGATGTCG
TTGATGAAA
dot-bracket secondary structure
........((((
((((.(((((.(((((((((.
((((((.((((((..(((((((((((.(((((....))))).....)))))))).)))(((.....)
)).))))))...)))))).)
))))))))..)))))))))))
)).......
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10132-akr
:
5e-41
microPC
no hits
UniProt
sp|O22582|H2B_GOSHI: 9e-20
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record