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Species belonging to selected taxon:

Elaeis guineensis



ABOUT THIS RECORD

ID: MNEST000561
species: Elaeis guineensis
miRNA family: MIRf1372
source: miRNEST

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCGAGCTTCTCGAAGATGTCG

miRNA*
GCGTGCTTCGCAAGCTCGCCG

mismatches: 1
bulges: 2

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pre-miRNA
CCCTCCGAGACGGCGTGCTTCGCAAGCTCGCCGGGGAGGACCAGGCGGACAGAGGTCTGAATCTCCCGGGAGGTAATGGTAGGCTTCTTGTTGTAGCGGG
CAAGCCTGGACGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAA


dot-bracket secondary structure
........((((((((.(((((.(((((((((.((((((.((((((..(((((((((((.(((((....))))).....)))))))).)))(((.....)
)).))))))...)))))).)))))))))..))))))))))))).......



SIMILARITIES
miRBase no hits

PMRD osa-miRf10132-akr: 5e-41

microPC no hits
UniProt sp|O22582|H2B_GOSHI: 9e-20

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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