miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000565
species: Eragrostis curvula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Eragrostis curvula Eragrostis Eragrostidinae Eragrostideae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACTCCCTCTGTCCCAATTT

miRNA*
 ATTGGGACGGAGGGGGTAGTG

mismatches: 0
bulges: 0
View larger
pre-miRNA
 GTCCAACTATATTACTCCCTCTGTCCCAATTTACTTTGATAAGCCAGGCAAGACGTTGGTATGAAATACCCTAAGTAAAGAAGGCATGCCCGAGCAATGA
AAGAAACCTCTCAACTACAACTTTGTGAGCCCAAAATCTTAGGTTCAAAATCACTCCCCAACCAACCCACCGAACTAACTCCATACGTTCATCATTCTGG
GCATCCTGGGAGTGTTTTTGAGTATCCAGATTCATAGAATGTTCAATGAACTTAAACAGACAGGTTGTCCAGGTTCAGAGAATGTTCAATGAATCTGGTA
CAAAGCCAGGATGCCAAGTAAATTGGGACGGAGGGGGTAGTGATTATTTG

dot-bracket secondary structure
.........(((((((((((((((((((((((((((.......((.(((.....(((.......)))..((((((.......(((.(((....))).(((
.((....)).)))..((((....)))).)))......)))))).((((((.(((((((.......((((..((((...........)))).......)))
)......))))))).))))))(((.((((((((((.((((((((..(((((((..((((.....))))..)))))))..)))))))).))))))))))))
)...))).)).....)))))))))))))))))))))))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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