miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Actinidia chinensis, Actinidia deliciosa, Actinidia eriantha



ABOUT THIS RECORD

ID: MNEST000006
species: Actinidia chinensis
miRNA family: MIR854
source: miRNEST

Taxonomy by NCBI:
Actinidia chinensis Actinidia Actinidiaceae Ericales asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTTGAGGATAGGGAGGAGGAC

miRNA*
 CCTTCTAATCTTATTTAGCT

mismatches: 4
bulges: 2
View larger
pre-miRNA
 ATGACGATGAGGTTGAGGATAGGGAGGAGGACGAGGAAGCAGAGGAAGAGGAGGAGGGGGATGAAGAAGAAGCCCTGCAGCCACCATAGAAGAGGAAGAA
ATGAAATACGAAACTAGTATTGTGTTTCTAAATGCTTTTAACTATGGATTTTATGTTAGGTCTATGACCTTCTAATCTTATTTAGCT

dot-bracket secondary structure
..........(((((((...(((.((((((.((.(((((((...((((.((....((((.............))))....)).((((((.(((((.((((
(((.(((((.......))))).))))))).....)))))..)))))).)))).))))...))).)).))))))..)))..)))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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