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Species belonging to selected taxon:

Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000643
species: Festuca arundinacea
miRNA family: MIRf16
source: miRNEST

Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACGAGCTCATGGTCGAGTGTT

miRNA*
 TTCTTACCATTAGCTCTGAT

mismatches: 4
bulges: 1
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pre-miRNA
 ATCTGTACTAGATTCTTACCATTAGCTCTGATCCTAATTCACGATCGCGTTGCCTATGTTCGGCAGGCTGCGGTTCAGTCTATCGGATGGCTATTGCGAA
TGGTGCAAGGACCAGCTCCGGGTGCGTTCGACGAGCTCATGGTCGAGTGTTTAAATCTAT

dot-bracket secondary structure
........(((((.((((((((.((((((((.......)))...(((((..(((...((((((.((((((.....)))))).)))))))))...))))).
(((.(((.(((.....)))...)))..)))..))))).))))).))).))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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