ABOUT THIS RECORD

ID: MNEST006685
species: Oryzias latipes
miRNA family: mir-153
source: miRNEST

Taxonomy by NCBI:
Oryzias latipes Oryzias Oryziinae Adrianichthyidae Adrianichthyoidei Beloniformes Atherinomorpha Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TCTTTGAACATCTCCCAGTGTCATTTTTGTGGTTTGCAGCTAGTACTCTGGCTCCAGTTGCATAGTCACAAAAATGAGCATTGGCAGGTGTGACTGG

dot-bracket secondary structure
.......((((((.((((((((((((((((((..((((((((((......)))..)))))))...)))))))))))).)))))).))))))......


SIMILARITIES

miRBase fru-mir-153b: 1e-43 PMRD no hits microPC no hits

UniProt no hits RFAM mir-153: 2e-42

most similar mature miRNAs

Identical with: tni-mir-153b from miRBase (MNEST034756)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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