miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000685
species: Festuca pratensis
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGGACTGAGGGAGTACT

miRNA*
 TACTTCCTCCGTCCCAATAAG

mismatches: 5
bulges: 0
View larger
pre-miRNA
 CAGATACCATAGTTAAATCATATACTTCCTCCGTCCCAATAAGTGACTCGGTTTTGTCTAGATACGGTATCTAGACACAGTTTAGCATATCTACAAAAAG
TTGAGTCACTTATTTTGGGACTGAGGGAGTACTATATGTATGAACACTCGCG

dot-bracket secondary structure
...........(((....(((((((((((((.((((((((((((((((((.((((((..(((((......((((((...))))))..)))))))))))..
.)))))))))))..))))))).)))))))))...))))....))).......


SIMILARITIES
miRBase far-MIR1122: 0.000002

PMRD hpr-miR1120: 0.0000000001

microPC miR1439: 0.0000001		UniProt no hits

RFAM MIR1122: 0.000000002		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;