ABOUT THIS RECORDspecies: Actinidia chinensis
miRNA family: MIR1094
source: miRNEST
Taxonomy by NCBI:
Actinidia chinensis Actinidia Actinidiaceae Ericales asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTTCTCTGTTCCACAGTGA miRNA* ATGTTGGAAAAGAGATCAGAGTA mismatches: 3 bulges: 2 |
pre-miRNA
GGGAAGCAACTTCATGTTGGAAAAGAGATCAGAGTATGCTGGGATAATGGATGCCTGCTCTTCTCTGTTCCACAGTGATATGGGTACT
dot-bracket secondary structure
.....((....((((..(((((.(((((..((((((.((.............)).))))))))))).)))))..)))).....))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGGAAGCAACTTCATGTTGGAAAAGAGATCAGAGTATGCTGGGATAATGGATGCCTGCTCTTCTCTGTTCCACAGTGATATGGGTACT
dot-bracket secondary structure
.....((....((((..(((((.(((((..((((((.((.............)).))))))))))).)))))..)))).....))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
