ABOUT THIS RECORDspecies: Ovis aries
miRNA family: mir-544
source: miRNEST
Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTCTGCATTTCTAACAAGCT miRNA* CGTGTTAAAATGCAGATTCT mismatches: 5 bulges: 1 |
pre-miRNA
AGTCCCCTGGGATCGTGTTAAAATGCAGATTCTGAATCAGTGGGTCTGGGGAGGGGGACTGAGAATTCTGCATTTCTAACAAGCTCCCAAGTGAG
dot-bracket secondary structure
.......(((((...((((((((((((((.......(((((...(((.....)))..)))))....))))))))).)))))...)))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGTCCCCTGGGATCGTGTTAAAATGCAGATTCTGAATCAGTGGGTCTGGGGAGGGGGACTGAGAATTCTGCATTTCTAACAAGCTCCCAAGTGAG
dot-bracket secondary structure
.......(((((...((((((((((((((.......(((((...(((.....)))..)))))....))))))))).)))))...)))))......
SIMILARITIES| miRBase bta-mir-544b-1: 0.00007 PMRD no hits microPC no hits | UniProt no hits RFAM mir-544: 2e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
