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Species belonging to selected taxon:

Sus scrofa, Bos taurus, Canis lupus familiaris, Ovis aries, Ursus americanus, Equus caballus, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST007071
species: Ovis aries
miRNA family: mir-544
source: miRNEST

Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTCTGCATTTCTAACAAGCT

miRNA*
CGTGTTAAAATGCAGATTCT

mismatches: 5
bulges: 1

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pre-miRNA
AGTCCCCTGGGATCGTGTTAAAATGCAGATTCTGAATCAGTGGGTCTGGGGAGGGGGACTGAGAATTCTGCATTTCTAACAAGCTCCCAAGTGAG

dot-bracket secondary structure
.......(((((...((((((((((((((.......(((((...(((.....)))..)))))....))))))))).)))))...)))))......


SIMILARITIES
miRBase bta-mir-544b-1: 0.00007

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-544: 2e-18
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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