ABOUT THIS RECORDspecies: Aedes aegypti
miRNA family: mir-29
source: miRNEST
Taxonomy by NCBI:
Aedes aegypti Stegomyia Aedes Aedes/Ochlerotatus group Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCACCATTCGAAATCAGTAC miRNA* ACTGGCTTCCAAAGGTGAGTAGA mismatches: 4 bulges: 1 |
pre-miRNA
ATTGGTTAATCTTCCTAAGTACTGGCTTCCAAAGGTGAGTAGATGGCATTCGATACACTCTAGCACCATTCGAAATCAGTACTGAAAGAGAAGATTTGT
dot-bracket secondary structure
.......(((((((((.((((((((.(((.((.((((..((((((..........)).)))).)))).)).))).))))))))...)).)))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTGGTTAATCTTCCTAAGTACTGGCTTCCAAAGGTGAGTAGATGGCATTCGATACACTCTAGCACCATTCGAAATCAGTACTGAAAGAGAAGATTTGT
dot-bracket secondary structure
.......(((((((((.((((((((.(((.((.((((..((((((..........)).)))).)))).)).))).))))))))...)).)))))))...
SIMILARITIES| miRBase aae-mir-285: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
