ABOUT THIS RECORD

ID: MNEST007246
species: Gasterosteus aculeatus
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Gasterosteus aculeatus Gasterosteus Gasterosteidae Gasterosteiformes Gasterosteiformes/Syngnathiformes group Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TCACGGCGCAGTAGCTGGTTGAAGGGGACCAAACCTCACAGAAACACCTGACTTGGTTCCGTTTGACCAGCCACGGCAAGGCG

dot-bracket secondary structure
.......((.((.((((((((((.((((((((...(((..........))).)))))))).)))))))))).)).))......


SIMILARITIES

miRBase dre-mir-133b: 8e-32 PMRD no hits microPC no hits

UniProt no hits RFAM mir-133: 1e-40

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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